This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M0A5.1

Display Name: China/LOC_000M0A5.1/2017
H. Yu & Y. Zhou

Sample details

Collection date
2017
Collection date (lower bound)
2017-01-01
Collection date (upper bound)
2017-12-31
Earliest release date
2021-05-12
Collection country
China
Collection subdivision level 1
Henan
Isolate name
9038Y1CVA10

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-28 16:27insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Fudan University, School of Public Health, Key Laboratory of Public Health Safety, Ministry of Education

INSDC

NCBI release date
2021-05-12
INSDC accession CV-A10

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics CV-A10

Length CV-A10
433
Total SNPs CV-A10
92
Total inserted nucs CV-A10
0
Total deleted nucs CV-A10
0
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
5.84%

Submission details

Submission ID
MN938814.1.CV-A10
Submitting group
Date submitted
2025-10-28 16:26:42 UTC
Date released
2025-10-28 17:11:36 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • A753T
  • T759C
  • A762G
  • T763A
  • T765G
  • G768A
  • G770A
  • A774C
  • A777C
  • T778A
  • C779G
  • C780T
  • C783T
  • G792C
  • G798A
  • T801C
  • G813T
  • C816A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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