This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LVX3.1

Romania/LOC_000LVX3.1/2013-08-28
S. Dinu, I. Panculescu-Gatej, A. Cotar, A. Sirbu, E. Falcuta, L. Prioteasa, G. Oprisan, D. Badescu, P. Reiter & C. Ceianu

Molecular Epidemiology, NIRDMI Cantacuzino, Splaiul Indepedentei, 103, Bucharest, N/A

Sample details

Collection date
2013-08-28
Earliest release date
2014-02-11
Sampling location
Romania (Danube Delta, Mila 26)
Isolate name
RO_mo17/2013

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-02-11
NCBI update date
2014-02-11
INSDC accession

Host

Host

Submission details

Submission ID
HG918031.1
Submitting group
Date submitted
2026-08-19 19:22:32 UTC
Date released
2026-08-19 19:38:27 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
137
Length
681 (6.17%)
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G9351A
  • T9357G
  • G9363A
  • G9372A
  • T9375C
  • C9376T
  • T9378A
  • C9381G
  • A9382C
  • G9385T
  • C9402A
  • T9405C
  • T9408A
  • T9417C
  • C9430A
  • C9432G
  • G9435A
  • T9438G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:A569S
  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
Deletions
N/A
Insertions
N/A

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