This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LVX3.1

Romania/LOC_000LVX3.1/2013-09-02
S. Dinu, I. Panculescu-Gatej, A. Cotar, A. Sirbu, E. Falcuta, L. Prioteasa, G. Oprisan, D. Badescu, P. Reiter & C. Ceianu

Molecular Epidemiology, NIRDMI Cantacuzino, Splaiul Indepedentei, 103, Bucharest, N/A

Sample details

Collection date
2013-09-02
Earliest release date
2014-02-11
Sampling location
Romania (Ialomita County, Fetesti City)
Isolate name
RO_hu149802/2013

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-02-11
NCBI update date
2014-02-11
INSDC accession

Host

Host

Submission details

Submission ID
HG918027.1
Submitting group
Date submitted
2026-11-04 12:14:56 UTC
Date released
2026-11-04 12:26:04 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
113
Length
562 (5.1%)
Amino Acid Mutations from founder clade
  • NS5:E638G
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9402A
  • T9405C
  • T9408A
  • T9417C
  • C9430A
  • C9432G
  • G9435A
  • T9438G
  • T9441C
  • T9444C
  • A9447G
  • G9449A
  • C9453T
  • C9456G
  • T9462C
  • T9465C
  • C9471T
  • A9477G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R590K
  • NS5:E638G
  • NS5:T641G
  • NS5:V740I
Deletions
N/A
Insertions
N/A

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