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LOC_000LVPK.1
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Download FASTA
Download metadata TSV
United_Kingdom/LOC_000LVPK.1/2018-09-10
M. Majumdar &
J. Martin
National Institute for Biological Standards and Control, Virology
Sample details
Collection date
2018-09-10
Earliest release date
2021-02-10
Sampling location
United Kingdom
Isolate name
CLI-B3-56-EV-D68
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-29 16:00
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2021-02-10
NCBI update date
2021-02-10
INSDC accession
MT641433.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
MT641433.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-29 16:00:06 UTC
Date released
2026-05-29 16:07:57 UTC
Clade
Clade EV-D68
B3
Genotype
Genotype
EV-D68
Alignment and QC
Total SNPs
493
Total ambiguous nucs
1
Length
3661 (49.7%)
Nucleotide mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
A
744
G
T
747
C
T
750
C
G
756
A
A
765
C
T
771
C
G
774
A
T
780
C
C
783
T
A
784
G
T
789
C
C
801
T
T
807
C
C
813
T
T
825
C
C
831
T
A
846
G
A
864
G
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
AY426531.1
reference
Substitutions
2A
2A:
I
22
T
2A:
V
37
I
2A:
R
65
K
2A:
A
99
V
2A:
V
144
A
2B
2B:
I
64
V
2C
2C:
K
58
N
2C:
R
72
Q
2C:
S
98
A
2C:
A
102
M
VP1
VP1:
S
1
I
VP1:
N
2
D
VP1:
V
13
I
VP1:
G
76
S
VP1:
K
84
R
VP1:
N
90
D
VP1:
A
92
T
VP1:
S
95
T
VP1:
G
97
Q
VP1:
T
98
A
VP1:
H
99
D
VP1:
K
110
R
VP1:
N
142
S
VP1:
N
143
S
VP1:
D
144
N
VP1:
S
145
N
VP1:
M
148
V
VP1:
K
168
E
Show more
VP2
VP2:
S
59
A
VP2:
S
73
A
VP2:
N
74
T
VP2:
Y
98
H
VP2:
D
136
N
VP2:
N
144
D
VP2:
R
151
A
VP2:
I
167
L
VP2:
V
195
A
VP2:
V
211
I
VP2:
V
225
M
VP3
VP3:
I
40
V
VP3:
M
46
V
VP3:
I
47
V
VP3:
D
59
E
VP3:
G
60
S
VP3:
N
62
V
VP3:
R
68
K
VP3:
V
73
A
VP3:
Q
74
L
VP3:
A
75
T
VP3:
L
77
V
VP3:
S
180
N
VP4
VP4:
I
18
V
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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