This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LUUA.1

France/LOC_000LUUA.1/2012-10-27
L. Josset, I. Schuffenecker & B. Lina

Centre National de Reference des Enterovirus et Parechovirus, Hospices Civils de Lyon

Sample details

Collection date
2012-10-27
Earliest release date
2017-11-29
Sampling location
France (Lyon)
Isolate name
12-43-611

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2017-11-29
NCBI update date
2017-11-29
INSDC accession

Host

Host

Submission details

Submission ID
KY272876.1
Submitting group
Date submitted
2026-07-17 10:32:30 UTC
Date released
2026-07-17 10:38:28 UTC

Clade

Clade EV-D68
B2

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
54
Length
347 (4.71%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2517G
  • T2520A
  • T2526C
  • C2529T
  • A2568G
  • T2580C
  • G2586A
  • G2589C
  • G2595C
  • A2598G
  • T2613C
  • G2614A
  • G2619A
  • C2625T
  • C2626T
  • G2631A
  • A2639G
  • T2646C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95A
  • VP1:G97Q
  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:N143S
  • VP1:D144N
  • VP1:S145N
  • VP1:M148V
Deletions
N/A
Insertions
N/A

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