This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LSQL.1

unknown/HC467794.1/unknown
K. J. Hennessy & P. W. Hayes

Sample details

Earliest release date
2010-04-21

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-08 16:32insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2010-04-21
NCBI update date
2010-04-21
INSDC accession

Host

Host

Submission details

Submission ID
HC467794.1
Submitting group
Date submitted
2026-05-08 16:31:52 UTC
Date released
2026-05-08 17:02:41 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
4
Total deleted nucs
4
Total frame shifts
1
Frame shifts
env:47-501(nt:1104-2469)
Length
1376 (12.5%)
Amino Acid Mutations from founder clade
  • env:K44E
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A1096G
  • T1442C
  • C1465T
  • C2466T
Deletions

1100-1103
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:K44E
Deletions

env

env:46
Insertions
N/A

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