This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LSQL.1

Romania/LOC_000LSQL.1/2015-08-28
S. Dinu

Molecular Epidemiology, Cantacuzino National Institute of Research, Splaiul Indepedentei, 103, Bucharest, N/A

Sample details

Collection date
2015-08-28
Earliest release date
2018-08-06
Sampling location
Romania
Isolate name
RO_mo123/2015

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-08-06
NCBI update date
2018-08-06
INSDC accession
BioProject accession

Host

Host

Submission details

Submission ID
LT996426.1
Submitting group
Date submitted
2026-07-21 15:35:32 UTC
Date released
2026-07-21 15:53:03 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
54
Total deleted nucs
3462
Length
258 (33.7%)
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • T5397C
  • T5403C
  • C5406T
  • C5412A
  • T5430A
  • G5436A
  • G5439C
  • G5442C
  • C5445T
  • C5451T
  • G5458A
  • G5460A
  • G5469A
  • T5472C
  • C5481G
  • C5484T
  • T5490G
  • T5496C
Deletions
5637-9098
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS3

  • NS3:V283I
  • NS3:S302A
  • NS3:S331A
  • NS3:L336M
Deletions
N/A
Insertions
N/A

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