This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LNLY.1

Display Name: LOC_000LNLY.1
M. T. Parra, J. M. D. Anton & I. J. D. Rodriguez

Submission details

Submission ID
PH267346.1
Submitting group
Date submitted
2025-07-11 18:51:15 UTC
Date released
2025-07-11 18:59:26 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-11 18:51insdc_ingest_userOPEN
Data use terms URL

Alignment and QC metrics

Completeness
100.00%
Length
11029
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
12
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2025-02-28
Collection date (upper bound)
2025-02-28

INSDC

INSDC accession
NCBI release date
2025-02-28
NCBI update date
2025-02-28

Lineage

Lineage
1A

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C450T
  • A630G
  • C1465T
  • T4027C
  • C4107T
  • A4940G
  • G5280A
  • T6405C
  • T7011C
  • T8235C
  • C10338T
  • C10624T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS2A

  • NS2A:C168R

    • NS3

  • NS3:Q110R

    • env

  • env:L167F
    • Deletions
    None
    Insertions
    None

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