This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LMQR.1

Taiwan/LOC_000LMQR.1/2008
C.-S. Chang, C.-C. Liao, A.-T. Liou, Y.-C. Chou, C.-S. Suen, M.-J. Hwang & C. Shih

Kaohsiung Medical University, Graduate Institute of Medicine

Sample details

Collection date
2008
Earliest release date
2020-11-30
Sampling location
Taiwan
Isolate name
No.13

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-29 16:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-11-30
NCBI update date
2020-11-30
INSDC accession

Host

Host

Submission details

Submission ID
MT360971.1
Submitting group
Date submitted
2026-05-29 16:00:06 UTC
Date released
2026-05-29 16:07:57 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
99
Total inserted nucs
5
Total deleted nucs
4
Length
747 (10.1%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C28T
  • G35A
  • T36C
  • T41G
  • G42T
  • C45T
  • T51C
  • A54T
  • T67A
  • A76G
  • T88C
  • A89G
  • T99C
  • G100A
  • C106T
  • C120T
  • G121T
  • C122T
Deletions

20, 60, 693, 738
Insertions

ins_10:C, ins_63:A, ins_128:CT, ins_703:G

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP4

  • VP4:M1N
Deletions
N/A
Insertions
N/A

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