This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LMJ3.1

Display Name: China/LOC_000LMJ3.1/2017
M. Chen & Y. Ju

Sample details

Collection date
2017
Collection date (lower bound)
2017-01-01
Collection date (upper bound)
2017-12-31
Earliest release date
2019-09-02
Collection country
China
Isolate name
236_WZH_GX_CHN_2017

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-14 14:32insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Guangxi Zhuang Autonomous Region Center for Disease Prevention and Control, Institute of Acute Infectious Diseases Control and Prevention

INSDC

NCBI release date
2019-09-02
INSDC accession CV-A10

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics CV-A10

Length CV-A10
894
Total SNPs CV-A10
206
Total inserted nucs CV-A10
0
Total deleted nucs CV-A10
0
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
12.07%

Submission details

Submission ID
MK839060.1.CV-A10
Submitting group
Date submitted
2025-10-14 14:32:52 UTC
Date released
2025-10-14 15:09:04 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • C2439T
  • C2445T
  • C2457A
  • C2460T
  • C2463T
  • T2470C
  • A2473G
  • C2475A
  • G2477A
  • T2481A
  • T2483C
  • G2487C
  • C2488A
  • G2490A
  • C2493T
  • A2496T
  • C2498G
  • T2499C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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