This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000LJVJ.1

Romania/LOC_000LJVJ.1/2013-09-02
S. Dinu, I. Panculescu-Gatej, A. Cotar, A. Sirbu, E. Falcuta, L. Prioteasa, G. Oprisan, D. Badescu, P. Reiter & C. Ceianu

NIRDMI Cantacuzino, Molecular Epidemiology, Splaiul Indepedentei, 103, Bucharest, N/A

Sample details

Collection date
2013-09-02
Earliest release date
2015-01-28
Sampling location
Romania
Isolate name
RO_mo354/2013

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2015-01-28
NCBI update date
2015-01-28
INSDC accession

Host

Host

Submission details

Submission ID
LN808702.1
Submitting group
Date submitted
2026-07-01 18:03:48 UTC
Date released
2026-07-01 18:19:42 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
145
Length
656 (5.95%)
Amino Acid Mutations from founder clade
  • env:T159M
  • env:S199G
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C976T
  • T978A
  • T1000C
  • A1005G
  • A1020T
  • G1029T
  • T1033C
  • T1038A
  • C1041G
  • C1053T
  • C1056T
  • T1062C
  • C1065A
  • T1071A
  • G1074A
  • T1083A
  • C1089T
  • T1092C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:E55D
  • env:T64S
  • env:D83E
  • env:R93K
  • env:S122T
  • env:I126T
  • env:R128W
  • env:T129I
  • env:L131Q
  • env:V159M
  • env:L167F
  • env:A172S
  • env:N199G
  • env:T205S
  • env:T208A
  • env:T210S
Deletions
N/A
Insertions
N/A

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