This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000L7WT.1

Display Name: Romania/LOC_000L7WT.1/2013-08-28
S. Dinu, I. Panculescu-Gatej, A. Cotar, A. Sirbu, E. Falcuta, L. Prioteasa, G. Oprisan, D. Badescu, P. Reiter & C. Ceianu

Submission details

Submission ID
LN808693.1
Submitting group
Date submitted
2025-07-04 13:34:16 UTC
Date released
2025-07-04 13:38:06 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-04 13:34insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
NIRDMI Cantacuzino, Molecular Epidemiology, Splaiul Indepedentei, 103, Bucharest, N/A

Alignment and QC metrics

Completeness
6.10%
Length
673
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
133
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2015-01-28
Collection country
Romania
Collection date
2013-08-28
Collection date (lower bound)
2013-08-28
Collection date (upper bound)
2013-08-28
Isolate name
RO_mo33/2013

Host

Host name scientific
Culex pipiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2015-01-28
NCBI update date
2015-01-28

Lineage

Lineage
2

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G1716A
  • G1722T
  • A1723G
  • A1725G
  • A1728T
  • T1729C
  • G1731A
  • C1734G
  • A1737G
  • A1740G
  • G1743A
  • A1746T
  • C1750T
  • T1755C
  • T1762C
  • T1767C
  • C1773G
  • G1782T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    env

  • env:I253V
  • env:L312A
  • env:A369S
  • env:K413R
  • env:V442I
    • Deletions
    None
    Insertions
    None

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