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LOC_000KRX9.1
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Download FASTA
Download metadata TSV
USA/F15606/2005-09-08
J. F. Anderson,
A. J. Main,
P. M. Armstrong,
T. G. Andreadis &
F. J. Ferrandino
The Connecticut Agricultural Experiment Station, Entomology
Sample details
Collection date
2005-09-08
Earliest release date
2014-09-03
Sampling location
USA
Isolate name
F15606
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2014-09-03
NCBI update date
2015-02-05
INSDC accession
KM215581.1
Host
Host
mosquitos (Aedes vexans)
Submission details
Submission ID
KM215581.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-01 18:03:37 UTC
Date released
2026-07-01 18:18:29 UTC
Lineage
Lineage
1A
Files
Annotations
LOC_000KRX9.1.embl
Alignment and QC
Total SNPs
9
Length
1857 (16.8%)
Amino Acid Mutations from founder clade
NS3:
T
249
P
NS3:
I
356
T
Variant
False
Nucleotide mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
C
4803
T
C
5085
T
G
5280
A
C
5811
T
A
6117
G
C
6138
T
C
6238
T
T
6405
C
C
6426
T
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_009942.1
reference
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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