This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000KPZ7.1

unknown/LOC_000KPZ7.1/unknown
R. Shattock, P. Mckay, M. Watson & E. Harper

Sample details

Earliest release date
2025-05-28

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-05-28
NCBI update date
2025-05-28
INSDC accession

Submission details

Submission ID
PH487826.1
Submitting group
Date submitted
2026-08-17 10:48:01 UTC
Date released
2026-08-17 11:11:59 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
82
Length
378 (3.43%)
Amino Acid Mutations from founder clade
  • NS4A:G18V
  • NS4A:A55V
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • T6471A
  • G6474A
  • A6477C
  • A6484G
  • T6492G
  • G6495C
  • A6498G
  • A6500G
  • G6501A
  • G6510A
  • G6521T
  • G6525A
  • A6528T
  • A6534G
  • C6538T
  • T6540G
  • C6546G
  • C6552T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS4A

  • NS4A:I6V
  • NS4A:K11R
  • NS4A:G18V
  • NS4A:A55V
  • NS4A:T64S
  • NS4A:M65L
  • NS4A:A85V
  • NS4A:V86I
  • NS4A:V89A
Deletions
N/A
Insertions
N/A

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