This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000KPZ7.1

Display Name: Spain/LOC_000KPZ7.1/2016
C. Andres, J. Vila, L. Gimferrer, M. Pinana, J. Esperalba, M. G. Codina, M. Barnes, M. C. Martin, F. Fuentes, S. Rubio, P. Alcubilla, C. Rodrigo, T. Pumarola & A. Anton

Sample details

Collection date
2016
Collection date (lower bound)
2016-01-01
Collection date (upper bound)
2016-12-31
Earliest release date
2020-05-25
Collection country
Spain
Isolate name
EVA71/Catalonia/NSVH110318902/2016

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-22 15:57insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Microbiology Department, Hospital Universitari Vall d'Hebron, Vall d'Hebron Research Institute (VHIR), Respiratory Viruses Unit, Virology Section

INSDC

NCBI release date
2020-05-25
NCBI update date
2020-05-25
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
252
Total SNPs
34
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
3.40%
Total stop codons
0

Submission details

Submission ID
MN457717.1
Submitting group
Date submitted
2026-01-22 15:56:46 UTC
Date released
2026-01-22 16:08:45 UTC

Genotype

Genotype
EV-A71

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T2600A
  • G2603A
  • G2606A
  • T2618C
  • T2636A
  • T2648C
  • C2651T
  • T2657C
  • C2672T
  • C2675T
  • T2678C
  • C2690T
  • A2696G
  • A2699G
  • C2702G
  • T2723C
  • A2730G
  • C2738A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions

    VP1

  • VP1:K98E
    • Deletions
    None
    Insertions
    None

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