This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
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LOC_000KPNV.1
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Display Name: Australia/LOC_000KPNV.1/1963
B. Huang,
N. A. Prow,
A. F. van den Hurk,
R. J. N. Allcock,
P. R. Moore,
S. L. Doggett &
D. Warrilow
Submission details
Submission ID
KX394392.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-07-04 13:34:11 UTC
Date released
2025-07-04 13:37:36 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2025-07-04 13:34
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Forensic and Scientific Services, Public and Environmental Health
Alignment and QC metrics
Completeness
97.97%
Length
10799
Total ambiguous nucs
0
Total deleted nucs
7
Total frame shifts
0
Total inserted nucs
1
Total SNPs
1261
Total stop codons
0
Total unknown nucs
0
Sample details
Earliest release date
2016-11-09
Collection country
Australia
Collection date
1963
Collection date (lower bound)
1963-01-01
Collection date (upper bound)
1963-12-31
Isolate name
IN761
INSDC
INSDC accession
KX394392.1
NCBI release date
2016-11-09
NCBI update date
2020-07-07
Lineage
Lineage
1B
Nucleotide mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
A
50
T
A
51
T
C
52
G
G
126
A
C
210
T
C
216
T
A
218
G
T
227
C
A
231
G
C
255
T
C
258
T
A
267
G
A
285
G
G
307
A
C
336
T
T
339
C
T
348
C
G
363
A
Show more
Deletions
10475-10481
Insertions
ins_10463:T
Amino acid mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
2K
2K:
M
15
L
NS1
NS1:
V
88
I
NS1:
K
102
R
NS1:
V
135
I
NS1:
K
170
R
NS1:
I
236
V
NS1:
V
245
I
NS1:
N
264
S
NS1:
S
327
N
NS2A
NS2A:
V
112
A
NS2A:
H
119
Y
NS2A:
I
129
M
NS2A:
L
212
F
NS2B
NS2B:
S
64
G
NS2B:
V
103
A
NS3
NS3:
I
175
V
NS3:
P
249
A
NS3:
K
304
R
NS3:
S
331
A
NS3:
T
356
I
NS3:
V
384
I
NS3:
I
407
V
NS3:
F
486
C
NS3:
A
610
S
NS4A
NS4A:
L
5
F
NS4A:
A
85
V
NS4A:
V
89
A
NS4B
NS4B:
S
15
G
NS4B:
V
23
T
NS4B:
M
29
I
NS4B:
A
95
S
NS4B:
A
114
S
NS4B:
I
176
V
NS4B:
V
186
L
NS5
NS5:
T
25
I
NS5:
I
33
T
NS5:
G
47
R
NS5:
V
49
I
NS5:
I
162
L
NS5:
R
177
K
NS5:
R
247
K
NS5:
D
312
E
NS5:
K
531
R
NS5:
V
731
T
NS5:
A
877
S
capsid
capsid:
K
41
R
capsid:
I
44
T
capsid:
G
71
S
capsid:
V
113
F
capsid:
S
120
G
env
env:
D
67
E
env:
A
89
S
env:
R
93
K
env:
I
126
T
env:
N
154
K
env:
V
159
T
env:
T
162
A
env:
L
167
F
env:
N
199
S
env:
G
229
E
env:
T
231
N
env:
V
338
I
env:
A
365
S
env:
T
410
A
env:
L
483
F
prM
prM:
V
22
I
prM:
S
72
L
prM:
A
105
S
prM:
V
156
A
Deletions
None
Insertions
None
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