This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000KBN7.1

Display Name: Viet_Nam/LOC_000KBN7.1/2017
V. A. Ternovoy, E. P. Ponomareva, N. L. Tupota, R. B. Bayandin, M. Y. Kartashov, A. N. Shvalov, V. B. Loktev & T. T. Nhai

Sample details

Collection date
2017
Collection date (lower bound)
2017-01-01
Collection date (upper bound)
2017-12-31
Earliest release date
2023-04-26
Collection country
Viet Nam
Isolate name
29

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-12 15:10insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
SRC VB Vector, Molecular virology

INSDC

NCBI release date
2023-04-26
NCBI update date
2023-04-26
INSDC accession

Host

Host taxon id
Host name scientific
Gallus gallus

Alignment and QC metrics

Length
242
Total SNPs
52
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
2.19%
Total stop codons
0

Submission details

Submission ID
OP593325.1
Submitting group
Date submitted
2025-09-12 15:10:02 UTC
Date released
2025-09-12 15:23:37 UTC

Lineage

Lineage
2

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G2937A
  • T2940C
  • T2943C
  • T2952A
  • C2955G
  • C2958G
  • C2961T
  • G2967C
  • C2973T
  • A2978G
  • G2980A
  • C2982T
  • A2983C
  • A2985G
  • G2990C
  • C2991G
  • T3000G
  • T3006C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS1

  • NS1:K170R
  • NS1:V171I
  • NS1:S174T
  • NS1:L192M
  • NS1:I194V
  • NS1:R205G
    • Deletions
    None
    Insertions
    None

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