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LOC_00004HV.1
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Download FASTA
Download metadata TSV
Display Name: Israel/LOC_00004HV.1
C. Banet-Noach,
M. Malkinson,
A. Brill,
I. Samina,
H. Yadin,
Y. Weisman,
S. Pokamunski,
R. King,
V. Deubel,
Y. Stram &
C. Banet
Sample details
Collection date (upper bound)
2001-05-31
Earliest release date
2001-05-31
Collection country
Israel
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-10-20 15:58
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Kimron Veterinary Institute, Avian and Aquatic Diseases
INSDC
NCBI release date
2001-05-31
NCBI update date
2016-07-22
INSDC accession
AF380666.1
Host
Host taxon id
8842
Host name scientific
Anser
Alignment and QC metrics
Length
1278
Total SNPs
42
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
11.59%
Total stop codons
0
Submission details
Submission ID
AF380666.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-10-20 15:58:24 UTC
Date released
2025-10-20 16:00:00 UTC
Lineage
Lineage
1A
Files
Annotations
LOC_00004HV.1.embl
Nucleotide mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
C
990
T
A
1005
G
G
1011
A
T
1014
C
T
1071
C
C
1089
T
G
1116
T
G
1185
A
T
1235
A
G
1244
A
T
1332
C
T
1343
C
C
1377
T
T
1389
C
T
1407
C
C
1422
T
G
1441
A
A
1446
G
Show more
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_009942.1
reference
Substitutions
env
env:
F
90
Y
env:
R
93
K
env:
I
126
T
env:
V
159
I
env:
L
167
F
Deletions
None
Insertions
None
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