This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000049C.1

Display Name: LOC_000049C.1
M. Hindiyeh, L. M. Shulman, E. Mendelson, L. Weiss, Z. Grossman & H. Bin

Submission details

Submission ID
AF375042.1
Submitting group
Date submitted
2025-07-11 18:50:54 UTC
Date released
2025-07-11 18:51:17 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-11 18:51insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Ministry of Health, Public Health Laboratories, Central Virology Laboratory

Alignment and QC metrics

Completeness
14.94%
Length
1648
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
6
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2002-03-14
Collection date (upper bound)
2002-03-14
Isolate name
WN_0043

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2002-03-14
NCBI update date
2016-07-26

Lineage

Lineage
1A

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C483T
  • A630G
  • T666C
  • A1102G
  • C1215T
  • C1465T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    env

  • env:M46V
  • env:L167F
    • Deletions
    None
    Insertions
    None

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