This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00003X2.1

LOC_00003X2.1
S. Chinikar, S. M. Persson, M. Johansson, L. Bladh, M. Goya, B. Houshmand, A. Mirazimi, A. Plyusnin, A. Lundkvist, M. Nilsson & S. Shinikar

Swedish Institue for Infectious Disease Control, Centre for Microbiological Preparedness

Sample details

Earliest release date
2003-09-09
Isolate name
782/02

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2003-09-09
INSDC accession S

Submission details

Submission ID
AY366377.1.S
Submitting group
Date submitted
2026-10-09 12:02:51 UTC
Date released
2026-10-09 12:03:39 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
66
Length S
499 (29.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C166T
  • G169A
  • T172C
  • C178A
  • T182C
  • G190A
  • G196A
  • T199C
  • C208T
  • C217T
  • G229A
  • C235T
  • A268C
  • G271A
  • T289C
  • G292A
  • C295T
  • A298C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
  • NP:H195R
  • NP:D199E
Deletions
N/A
Insertions
N/A

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