This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
Tajikistan/LOC_00003X2.1
S. V. Seregin, I. Y. Tumanova, O. I. Vyshemirski, I. D. Petrova, D. K. Lvov, V. L. Gromashevski, E. I. Samokhvalov, G. I. Tiunnikov, V. V. Gutorov, F. H. Tishkova, O. A. Daniyarov, S. V. Netesov, V. S. Petrov, G. I. Tyunnikov & S. S. Seregin

State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

Sample details

Earliest release date
2003-08-18
Sampling location
Tajikistan
Isolate name
TAJ/HU8978

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2003-08-18
INSDC accession S

Submission details

Submission ID
AY297691.2.S
Date submitted
2026-11-04 12:14:31 UTC
Date released
2026-11-04 12:15:27 UTC

Lineage

Segment S Lineage
IV.2

Files


Alignment and QC

Total SNPs S
227
Total inserted nucs S
1
Length S
1673 (100%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T39C
  • T48C
  • G54A
  • A61G
  • C64T
  • G67A
  • T79C
  • G99A
  • C142T
  • T157C
  • C166T
  • C178A
  • T182C
  • G190A
  • G196A
  • A209G
  • C214T
  • C217T
Deletions
N/A
Insertions

S

ins_1579:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R15K
  • NP:S52G
  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
  • NP:I180F
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:K252R
  • NP:R270K
  • NP:S275N
  • NP:S301G
  • NP:A307S
  • NP:V319R
  • NP:V436I
Deletions
N/A
Insertions
N/A

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