This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00003W4.1

Display Name: LOC_00003W4.1
G. D. Ebel, A. P. II Dupuis, K. Ngo, D. Nicholas, E. Kauffman, S. A. Jones, D. Young, J. Maffei, P.-Y. Shi, K. Bernard, L. D. Kramer & E. B. Kauffman

Sample details

Collection date (upper bound)
2001-06-16
Earliest release date
2001-06-16
Isolate name
3000017

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-16 15:04insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Wadsworth Center, Infectious Disease

INSDC

NCBI release date
2001-06-16
NCBI update date
2016-07-23
INSDC accession

Alignment and QC metrics

Length
1504
Total SNPs
4
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
13.64%
Total stop codons
0

Submission details

Submission ID
AF346309.1
Submitting group
Date submitted
2026-02-16 15:03:30 UTC
Date released
2026-02-16 15:04:54 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C1465T
  • C1974T
  • T2280C
  • C2424T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    env

  • env:L167F
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue