This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00003GZ.1

Tajikistan/LOC_00003GZ.1
S. V. Seregin, I. Y. Tumanova, O. I. Vyshemirski, I. D. Petrova, D. K. Lvov, V. L. Gromashevski, E. I. Samokhvalov, G. I. Tiunnikov, V. V. Gutorov, F. H. Tishkova, O. A. Daniyarov, S. V. Netesov, V. S. Petrov & G. I. Tyunnikov

State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

Sample details

Earliest release date
2003-08-18
Sampling location
Tajikistan
Isolate name
TAJ/HU9112

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-12 21:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2003-08-18
INSDC accession S segment

Submission details

Submission ID
AY297688.1.S
Submitting group
Date submitted
2026-06-12 21:07:57 UTC
Date released
2026-06-12 21:09:43 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
65
Length S segment
497 (27.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T813C
  • A816G
  • T819C
  • C825T
  • G828A
  • T831C
  • G848A
  • G849A
  • G852A
  • T858C
  • G863A
  • T864C
  • G885A
  • C894T
  • C909T
  • T912C
  • G915A
  • T918C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:R270K
  • NP:S275N
Deletions
N/A
Insertions
N/A

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