This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000031V.1

Display Name: LOC_000031V.1
A. Sanchez, S. G. Trappier, B. W. Mahy, C. J. Peters & S. T. Nichol

Sample details

Collection date (upper bound)
1995-10-26
Earliest release date
1995-10-26

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-28 16:33insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Anthony Sanchez, Special Pathogens Branch, Division of Viral and Rickettsial Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Blgd. 15, Room SB611, Atlanta, GA 30333

INSDC

NCBI release date
1995-10-26
NCBI update date
2002-08-28
INSDC accession

Alignment and QC metrics

Length
2362
Total SNPs
118
Total inserted nucs
0
Total deleted nucs
1
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
12.52%
Total stop codons
0

Submission details

Submission ID
U28134.1
Submitting group
Date submitted
2025-11-28 16:33:37 UTC
Date released
2025-11-28 16:34:31 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • C5881T
  • G5902T
  • G5943A
  • G5952A
  • A5956G
  • C5962T
  • T5972A
  • A5973G
  • A5986C
  • G5990A
  • G6002A
  • G6030A
  • C6033T
  • G6042A
  • C6078T
  • T6114C
  • T6174A
  • A6243G
    • Deletions
    8214
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002549.1 reference

    Substitutions

    GP

  • GP:G2E
  • GP:K95Q
  • GP:V203A
  • GP:D237N
  • GP:R243L
  • GP:H261Q
  • GP:R272K
  • GP:A310T
  • GP:A322T
  • GP:I326T
  • GP:N346D
  • GP:P352S
  • GP:I355V
  • GP:G374D
  • GP:A385T
  • GP:H395N
  • GP:I403T
  • GP:R404G

    • sGP

  • sGP:G2E
  • sGP:K95Q
  • sGP:V203A
  • sGP:D237N
  • sGP:R243L
  • sGP:H261Q
  • sGP:R272K

    • ssGP

  • ssGP:G2E
  • ssGP:K95Q
  • ssGP:V203A
  • ssGP:D237N
  • ssGP:R243L
  • ssGP:H261Q
  • ssGP:R272K
  • ssGP:S309N
    • Deletions
    None
    Insertions
    None

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