This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000031V.1

Display Name: Russia/LOC_000031V.1
A. G. Prilipov, E. I. Samokhvalov, D. K. Lvov, V. L. Gromashevsky, A. M. Butenko, O. I. Vyshemirsky, V. F. Laritchev, S. Y. Gaidamovich, N. V. Khutoretskaya, A. G. Voronina, D. V. Novikov, V. V. Mokhonov & S. V. Alkhovsky

Submission details

Submission ID
AF237565.1
Submitting group
Date submitted
2025-07-11 18:50:54 UTC
Date released
2025-07-11 18:51:17 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-11 18:51insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Ivanovsky Virology Institute, Molecular Genetics

Alignment and QC metrics

Completeness
2.56%
Length
282
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
16
Total stop codons
0
Total unknown nucs
0

Sample details

Earliest release date
2000-03-14
Collection country
Russia
Collection date (upper bound)
2000-03-14

INSDC

INSDC accession
NCBI release date
2000-03-14
NCBI update date
2016-07-26

Lineage

Lineage
1A

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T1407C
  • C1422T
  • T1432C
  • G1441A
  • A1446G
  • C1465T
  • G1503A
  • A1512G
  • A1527G
  • G1545A
  • T1584C
  • C1620T
  • T1638C
  • T1650C
  • T1656C
  • A1683G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    env

  • env:S156P
  • env:V159I
  • env:L167F
    • Deletions
    None
    Insertions
    None

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