This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000030X.1

Display Name: Tajikistan/LOC_000030X.1
S. V. Seregin, I. Y. Tumanova, O. I. Vyshemirski, I. D. Petrova, D. K. Lvov, V. L. Gromashevski, E. I. Samokhvalov, G. I. Tiunnikov, V. V. Gutorov, F. H. Tishkova, O. A. Daniyarov, S. V. Netesov, V. S. Petrov & G. I. Tyunnikov

Submission details

Submission ID
AY297689.1.S
Submitting group
Date submitted
2025-07-04 13:11:18 UTC
Date released
2025-07-04 13:11:41 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-04 13:11insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

Alignment and QC metrics S

Completeness S
29.72%
Length S
497
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
59
Total unknown nucs S
0

Sample details

Earliest release date
2003-08-18
Collection country
Tajikistan
Collection date (upper bound)
2003-08-18
Isolate name
TAJ/HU9102

INSDC

INSDC accession S
NCBI release date
2003-08-18

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:T835C
  • S:A856G
  • S:T862C
  • S:G864A
  • S:C871T
  • S:G879A
  • S:G901A
  • S:T904C
  • S:T907C
  • S:C925T
  • S:T928C
  • S:T934C
  • S:A937G
  • S:A955G
  • S:A956G
  • S:C958T
  • S:T976C
  • S:T991C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:R270K
  • NP:S275N
  • NP:S301G
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue