This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000030X.1

Tajikistan/T-1304/unknown
A. G. Prilipov, E. I. Samokhvalov, D. K. Lvov, V. L. Gromashevsky, A. M. Butenko, O. I. Vyshemirsky, V. F. Laritchev, S. Y. Gaidamovich, N. V. Khutoretskaya, A. G. Voronina, D. V. Novikov, V. V. Mokhonov & S. V. Alkhovsky

Ivanovsky Virology Institute, Molecular Genetics

Sample details

Earliest release date
2000-03-14
Sampling location
Tajikistan
Isolate name
T-1304

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-21 21:23insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2000-03-14
NCBI update date
2016-07-26
INSDC accession

Submission details

Submission ID
AF237566.1
Submitting group
Date submitted
2026-03-21 21:23:04 UTC
Date released
2026-03-21 21:24:20 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
19
Length
282 (2.56%)
Amino Acid Mutations from founder clade
  • env:S156F
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T1407C
  • C1422T
  • C1431T
  • C1433T
  • G1441A
  • A1446G
  • C1465T
  • G1503A
  • G1524A
  • A1527G
  • G1545A
  • G1551A
  • C1572T
  • T1581C
  • T1584C
  • T1600C
  • T1638C
  • T1650C
  • A1683G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:S156F
  • env:V159I
  • env:L167F
Deletions
N/A
Insertions
N/A

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