This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00002D6.1

Kazakhstan/LOC_00002D6.1
L. N. Yashina, I. D. Petrova, V. V. Gutorov, I. I. Kuzina, K. S. Ospanov, S. V. Kazakov, S. K. Karimov, G. I. Tyunnikov, S. V. Seregin, I. V. Babkin, S. V. Netesov & V. S. Petrov

State Research Center of Virology and Biotechnology Vector, Biochemistry of Viruses

Sample details

Earliest release date
2001-05-12
Sampling location
Kazakhstan
Isolate name
HU2019

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2001-05-12
INSDC accession S

Submission details

Submission ID
AH010752.3.S
Submitting group
Date submitted
2026-11-04 12:14:31 UTC
Date released
2026-11-04 12:15:27 UTC

Lineage

Segment S Lineage
IV.2

Files

Annotations

Alignment and QC

Total SNPs S
85
Total deleted nucs S
193
Total unknown nucs S
100
Total frame shifts S
1
Frame shifts S
NP:258-483(nt:825-1504)
Length S
788 (52.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G314A
  • C316T
  • A322G
  • A325G
  • T334G
  • A337G
  • G367A
  • C370T
  • T382C
  • T385C
  • A394G
  • G397A
  • C400T
  • C403G
  • G409C
  • A425G
  • G428A
  • G429A
Deletions

S

632-824
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:G87S
  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
Deletions

NP

NP:193-257
Insertions
N/A

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