This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00002D6.1

Russia/LOC_00002D6.1
R. Hewson, A. Gmyl, L. Gmyl, S. E. Smirnova, G. Karganova, B. Jamil, R. Hasan, J. Chamberlain & C. Clegg

Hewson R., Special Pathogens, Health Protection Agency, CAMR, Salisbury, SP4 0JG

Sample details

Earliest release date
2004-10-01
Sampling location
Russia
Isolate name
K229-243

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 14:37insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2004-10-01
INSDC accession L segment

Submission details

Submission ID
AJ620683.1.L
Submitting group
Date submitted
2026-05-22 14:36:55 UTC
Date released
2026-05-22 14:38:31 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
135
Total inserted nucs L segment
2
Length L segment
980 (8.08%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • T11016G
  • T11017G
  • T11020C
  • A11021G
  • A11024T
  • T11025C
  • G11027C
  • C11029A
  • G11038A
  • A11056G
  • C11077T
  • A11083G
  • T11095C
  • T11098C
  • A11101T
  • C11107T
  • T11117C
  • G11122A
Deletions
N/A
Insertions

L segment

ins_11928:CG

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:N3649D
  • RdRp:I3650S
  • RdRp:D3651Q
  • RdRp:L3734F
  • RdRp:S3741N
  • RdRp:K3745R
  • RdRp:I3760V
  • RdRp:R3766K
  • RdRp:I3767V
  • RdRp:S3801P
  • RdRp:M3806I
  • RdRp:A3856T
  • RdRp:I3884V
  • RdRp:R3890K
  • RdRp:A3896T
  • RdRp:F3900I
  • RdRp:V3901E
  • RdRp:G3903K
Deletions
N/A
Insertions
N/A

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