This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00002C8.1

Display Name: LOC_00002C8.1
J. H. Scherret, M. Poidinger, J. S. Mackenzie, A. K. Broom, V. Deubel, W. I. Lipkin, T. Briese, E. A. Gould & R. A. Hall

Sample details

Collection date (upper bound)
2001-10-03
Earliest release date
2001-10-03
Isolate name
ArTB3573

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-17 22:40insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Queensland, Department of Microbiology and Parasitology

INSDC

NCBI release date
2001-10-03
NCBI update date
2016-07-26
INSDC accession

Alignment and QC metrics

Length
669
Total SNPs
29
Total inserted nucs
1
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
6.06%
Total stop codons
0

Submission details

Submission ID
AF196541.1
Submitting group
Date submitted
2025-12-17 22:40:06 UTC
Date released
2025-12-17 22:41:34 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C10137A
  • T10143C
  • G10155A
  • T10209C
  • A10221G
  • C10317T
  • T10323C
  • C10338T
  • T10374C
  • C10393T
  • G10398A
  • T10402C
  • A10405T
  • T10431C
  • C10435T
  • T10437C
  • G10444A
  • T10448G
    • Deletions
    None
    Insertions
    ins_10463:T

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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