This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000028G.1

LOC_000028G.1
D. S. Millar & J. R. Meruki

Sample details

Earliest release date
2010-03-18

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-29 15:56insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2010-03-18
INSDC accession L segment

Submission details

Submission ID
FV537249.1.L
Submitting group
Date submitted
2026-05-29 15:56:07 UTC
Date released
2026-05-29 16:07:55 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
2630
Length L segment
12108 (100%)
Stop codons L segment
RdRp:9,RdRp:99,RdRp:119,RdRp:494,RdRp:630,RdRp:651,RdRp:843,RdRp:873,RdRp:874,RdRp:938,RdRp:1018,RdRp:1224,RdRp:1332,RdRp:1580,RdRp:1642,RdRp:1810,RdRp:1905,RdRp:1928,RdRp:1995,RdRp:2083,RdRp:2202,RdRp:2362,RdRp:2385,RdRp:2444,RdRp:2542,RdRp:2808,RdRp:2970,RdRp:2997,RdRp:3240,RdRp:3269,RdRp:3347,RdRp:3396,RdRp:3482,RdRp:3631,RdRp:3661,RdRp:3764,RdRp:3942
Total stop codons L segment
37

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • G8A
  • G23A
  • G32A
  • G41A
  • G43A
  • G45A
  • G51A
  • G54A
  • G56A
  • G57A
  • G69A
  • G71A
  • G79A
  • G80A
  • G88A
  • G90A
  • G93A
  • G98A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:M1I
  • RdRp:D2N
  • RdRp:R5K
  • RdRp:S6N
  • RdRp:D8N
  • RdRp:W9*
  • RdRp:V12I
  • RdRp:A14T
  • RdRp:G15N
  • RdRp:V18I
  • RdRp:R22K
  • RdRp:D27N
  • RdRp:E30K
  • RdRp:V32I
  • RdRp:R33Q
  • RdRp:G36N
  • RdRp:D37N
  • RdRp:G38K
Deletions
N/A
Insertions
N/A

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