This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00001PL.1

LOC_00001PL.1
A. Sanchez, S. G. Trappier, B. W. Mahy, C. J. Peters & S. T. Nichol

Anthony Sanchez, Special Pathogens Branch, Division of Viral and Rickettsial Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Blgd. 15, Room SB611, Atlanta, GA 30333

Sample details

Earliest release date
1995-10-26
Isolate name
Boniface

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
1995-10-26
NCBI update date
2002-08-28
INSDC accession

Submission details

Submission ID
U28134.1
Submitting group
Date submitted
2026-09-17 20:12:28 UTC
Date released
2026-09-17 20:13:13 UTC

Files

Annotations

Alignment and QC

Total SNPs
118
Total deleted nucs
1
Length
2362 (12.5%)

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions
  • C5881T
  • G5902T
  • G5943A
  • G5952A
  • A5956G
  • C5962T
  • T5972A
  • A5973G
  • A5986C
  • G5990A
  • G6002A
  • G6030A
  • C6033T
  • G6042A
  • C6078T
  • T6114C
  • T6174A
  • A6243G
Deletions
8214
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_006432.1 reference

Substitutions

GP

  • GP:G2E
  • GP:K95Q
  • GP:V203A
  • GP:D237N
  • GP:R243L
  • GP:H261Q
  • GP:R272K
  • GP:A310T
  • GP:A322T
  • GP:I326T
  • GP:N346D
  • GP:P352S
  • GP:I355V
  • GP:G374D
  • GP:A385T
  • GP:H395N
  • GP:I403T
  • GP:R404G

sGP

  • sGP:G2E
  • sGP:K95Q
  • sGP:V203A
  • sGP:D237N
  • sGP:R243L
  • sGP:H261Q
  • sGP:R272K

ssGP

  • ssGP:G2E
  • ssGP:K95Q
  • ssGP:V203A
  • ssGP:D237N
  • ssGP:R243L
  • ssGP:H261Q
  • ssGP:R272K
  • ssGP:S309N
Deletions
N/A
Insertions
N/A

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