This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00001NN.1

Display Name: Russia/LOC_00001NN.1
I. D. Petrova, S. V. Seregin, I. I. Kuzina, O. I. Vyshemirski, D. K. Lvov, G. I. Tyunnikov, V. V. Gutorov, L. N. Yashina, S. V. Netesov, V. S. Petrov & V. V. Goutorov

Sample details

Collection date (upper bound)
2002-03-19
Earliest release date
2002-03-19
Collection country
Russia
Collection subdivision level 1
Astrahan region
Isolate name
ASTR/TI28870

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-28 16:26insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

INSDC

NCBI release date
2002-03-19
INSDC accession S

Host

Host taxon id
Host name scientific
Ixodoidea

Alignment and QC metrics S

Length S
220
Total SNPs S
40
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
13.16%

Submission details

Submission ID
AF481804.1.S
Submitting group
Date submitted
2025-10-28 16:26:28 UTC
Date released
2025-10-28 16:27:00 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:C310T
  • S:T313C
  • S:A322G
  • S:A325G
  • S:A331G
  • S:T334C
  • S:A337G
  • S:A349G
  • S:G353T
  • S:T364C
  • S:G367A
  • S:A379G
  • S:G381A
  • S:T382C
  • S:A386G
  • S:G391A
  • S:A394G
  • S:C400T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue