This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00001HY.1

Display Name: Russia/LOC_00001HY.1
I. D. Petrova, S. V. Seregin, I. I. Kuzina, O. I. Vyshemirski, D. K. Lvov, G. I. Tyunnikov, V. V. Gutorov, L. N. Yashina, S. V. Netesov & V. S. Petrov

Submission details

Submission ID
AF481803.1.S
Submitting group
Date submitted
2025-07-04 13:11:18 UTC
Date released
2025-07-04 13:11:41 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-04 13:11insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotechnology 'Vector', Biochemistry of Viruses

Alignment and QC metrics S

Completeness S
13.16%
Length S
220
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
40
Total unknown nucs S
0

Sample details

Earliest release date
2002-03-19
Collection subdivision level 1
Astrahan region
Collection country
Russia
Collection date (upper bound)
2002-03-19
Isolate name
ASTR/TI28832

Host

Host name scientific
Ixodoidea
Host taxon id

INSDC

INSDC accession S
NCBI release date
2002-03-19

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:C310T
  • S:T313C
  • S:A322G
  • S:A325G
  • S:A331G
  • S:T334C
  • S:A337G
  • S:A349G
  • S:G353T
  • S:T364C
  • S:G367A
  • S:A379G
  • S:G381A
  • S:T382C
  • S:A386G
  • S:G391A
  • S:A394G
  • S:C400T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue