This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DPBW.1

Kosovo/LOC_001DPBW.1/2012-10-01
L. Fajs, X. Jakupi, S. Ahmeti, I. Humolli, I. Dedushaj & T. Avsic-Zupanc

Institute of Microbiology and Immunology, MF, UL, Laboratory for Diagnosis of Zoonoses

Sample details

Collection date
2012-10-01
Earliest release date
2014-03-12
Sampling location
Kosovo
Isolate name
TAZ-57

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2014-03-12
INSDC accession M

Host

Host

Submission details

Submission ID
KF039955.1.M
Submitting group
Date submitted
2026-07-17 10:33:46 UTC
Date released
2026-07-17 10:35:49 UTC

Files

Annotations

Alignment and QC

Total SNPs M
75
Length M
421 (7.85%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C4644T
  • C4652T
  • T4661G
  • A4664G
  • G4666A
  • C4671T
  • T4676C
  • A4694T
  • C4697T
  • A4713G
  • A4730G
  • A4736G
  • T4742A
  • T4743C
  • G4745A
  • C4748T
  • A4751G
  • A4756G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:R1525K
  • GPC:H1527Y
  • GPC:E1534D
  • GPC:N1541D
  • GPC:K1555R
  • GPC:S1564D
  • GPC:S1589G
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595F
  • GPC:M1597I
  • GPC:F1600L
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1652R
Deletions
N/A
Insertions
N/A

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