This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DELL.1

Display Name: Turkey/LOC_001DELL.1/2014
F. Bayrakdar & D. Yagci Caglayik

Sample details

Collection date
2014
Collection date (lower bound)
2014-01-01
Collection date (upper bound)
2014-12-31
Earliest release date
2015-12-09
Collection country
Turkey
Isolate name
Turkey/Artova02/2014

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-23 08:53insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Public Health Institution of Turkey, Virology

INSDC

NCBI release date
2015-12-09
INSDC accession M

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics M

Length M
519
Total SNPs M
86
Total inserted nucs M
0
Total deleted nucs M
0
Total ambiguous nucs M
0
Total unknown nucs M
0
Total frame shifts M
0
Completeness M
9.67%
Total stop codons M
0

Submission details

Submission ID
KT266844.1.M
Submitting group
Date submitted
2026-01-23 08:53:16 UTC
Date released
2026-01-23 08:56:12 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • M:A4616G
  • M:T4619C
  • M:C4622T
  • M:G4625A
  • M:C4628T
  • M:T4634C
  • M:T4640C
  • M:C4644T
  • M:C4652T
  • M:T4661G
  • M:A4664G
  • M:C4671T
  • M:T4676C
  • M:A4694T
  • M:A4701C
  • M:A4713G
  • M:A4730G
  • M:A4736G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    GPC

  • GPC:H1527Y
  • GPC:E1534D
  • GPC:K1537Q
  • GPC:N1541D
  • GPC:S1564D
  • GPC:S1589G
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595L
  • GPC:M1597I
  • GPC:F1600L
  • GPC:L1603I
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1652R
  • GPC:N1655S
  • GPC:K1661R
  • GPC:E1666D
  • GPC:R1672K
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue