This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDDA.1

Display Name: Malaysia/LOC_000SDDA.1
D. Perera, M. Apandi & M. J. Cardosa

Sample details

Collection date (upper bound)
2007-12-31
Earliest release date
2007-12-31
Collection country
Malaysia
Isolate name
S10862-SAR-98

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-27 12:23insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Institute of Health and Community Medicine, Universiti Malaysia Sarawak

INSDC

NCBI release date
2007-12-31

Alignment and QC metrics

Length
7409
Total SNPs
1467
Total inserted nucs
2
Total deleted nucs
1
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
100.00%
Total stop codons
0

Submission details

Submission ID
DQ341359.1.EV-A71
Submitting group
Date submitted
2025-11-27 12:22:06 UTC
Date released
2025-11-27 12:28:11 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T11C
  • G12T
  • T13G
  • G14T
  • T17G
  • G19T
  • T20G
  • C28T
  • T36C
  • C47T
  • T48C
  • T51C
  • A54T
  • T61C
  • C62T
  • T63G
  • C64A
  • A76G
    • Deletions
    104
    Insertions
    ins_739:TC

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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