This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDDA.1

Turkey/LOC_000SDDA.1/2012-04-16
T. Aligholipour Farzani, A. Hanifehnezhad, K. Foldes, K. Ergunay, E. Yilmaz, H. Hashim Mohamed Ali, A. Ozkul, T. A. Farzani & H. H. Muhamed Ali

Faculty of Veterinary Medicine, Ankara University, Department of Virology

Sample details

Collection date
2012-04-16
Earliest release date
2019-02-19
Sampling location
Turkey
Isolate name
Ank2

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-02-19
INSDC accession S segment

Host

Host

Submission details

Submission ID
MK309333.1.S
Submitting group
Date submitted
2026-10-13 10:58:15 UTC
Date released
2026-10-13 11:01:48 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
189
Length S segment
1371 (75.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • A76T
  • T77G
  • A84T
  • T85G
  • A93G
  • A98T
  • C99T
  • G118A
  • C126T
  • T141C
  • C150T
  • G155A
  • T159A
  • T166C
  • C171T
  • A186G
  • T195C
  • C201G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:M13W
  • NP:K15N
  • NP:W16G
  • NP:Y20F
  • NP:V27M
  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
  • NP:K265R
  • NP:R270K
  • NP:A307P
  • NP:Y311F
  • NP:V327I
  • NP:N419S
  • NP:R428K
Deletions
N/A
Insertions
N/A

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