This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S6GB.1

India/LOC_000S6GB.1/2015-01-25
P. Singh, M. Chhabra & S. Venkatesh

National Centre for Diseases Control, Biotechnology division

Sample details

Collection date
2015-01-25
Earliest release date
2016-11-09
Sampling location
India
Isolate name
NCDC-2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-28 14:54insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-11-09
INSDC accession S

Host

Host

Submission details

Submission ID
KU041807.1.S
Submitting group
Date submitted
2026-04-28 14:53:37 UTC
Date released
2026-04-28 15:02:21 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
32
Length S
222 (13.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A322T
  • A325G
  • T334G
  • A337G
  • G346A
  • G367A
  • C370A
  • A394G
  • G397A
  • C400T
  • C403G
  • C406T
  • G409C
  • G418A
  • A425T
  • G428A
  • G429A
  • T430C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124S
  • NP:G125N
Deletions
N/A
Insertions
N/A

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