This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QAGB.1

Iran/LOC_000QAGB.1/2022
S. Sarmadi, H. Najafi, Z. Ziafati Kafi, N. Sadri, F. Jamiri, A. Bakhshi & A. Abbassioun

University of Tehran, Microbiology & Immunology

Sample details

Collection date
2022
Earliest release date
2024-01-24
Sampling location
Iran
Isolate name
UT-SS2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-09 07:35insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-01-24
INSDC accession S segment

Host

Host

Submission details

Submission ID
PP107911.1.S
Submitting group
Date submitted
2026-06-09 07:35:01 UTC
Date released
2026-06-09 07:39:42 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
26
Length S segment
151 (8.36%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T288C
  • C294T
  • T297C
  • G306T
  • A309G
  • T318G
  • A321G
  • G330A
  • G339A
  • C342A
  • C345T
  • G351A
  • T354A
  • A378G
  • T387G
  • C390T
  • A393C
  • A405G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D116E
  • NP:A124S
  • NP:N125S
Deletions
N/A
Insertions
N/A

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