This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q372.1

Display Name: LOC_000Q372.1
F. J. Burt & R. Swanepoel

Sample details

Collection date (upper bound)
1997-01-28
Earliest release date
1997-01-28
Isolate name
SPU 245/87

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-04 14:36insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
National Institute for Virology, Special Pathogens Unit

INSDC

NCBI release date
1997-01-28
INSDC accession S

Alignment and QC metrics S

Length S
450
Total SNPs S
38
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
26.91%

Submission details

Submission ID
U84639.1.S
Submitting group
Date submitted
2025-11-04 14:36:22 UTC
Date released
2025-11-04 14:46:06 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:G190A
  • S:T199C
  • S:G202A
  • S:A209G
  • S:C217T
  • S:G229A
  • S:C235T
  • S:C244T
  • S:G271A
  • S:T289C
  • S:C295T
  • S:A322G
  • S:A325G
  • S:G346A
  • S:A358C
  • S:T385C
  • S:G391A
  • S:G397A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:S52G
  • NP:T124A
  • NP:G125N
  • NP:L179Q
    • Deletions
    None
    Insertions
    None

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