This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1ZK.1

Turkey/LOC_000Q1ZK.1
C. A. Whitehouse, H. Hottel, Z. Vatansever, A. Deniz, O. Ergonul, J. Paragas, A. Garrison, J. P. Kondig & L. P. Wasieloski

USAMRIID, Diagnostic Systems Division

Sample details

Earliest release date
2006-10-28
Sampling location
Turkey (Cevrecik)
Isolate name
Turkey 2005-98

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2006-10-28
INSDC accession S segment

Host

Host

Submission details

Submission ID
EF012362.1.S
Submitting group
Date submitted
2026-09-14 15:44:58 UTC
Date released
2026-09-14 15:46:34 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
42
Length S segment
262 (14.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G276A
  • G282A
  • C294T
  • A309G
  • A315G
  • A321G
  • C327T
  • A333G
  • G337T
  • G339A
  • C342A
  • T348C
  • G351A
  • A363G
  • G365A
  • T366C
  • A370G
  • A378G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:I162F
Deletions
N/A
Insertions
N/A

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