This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1LB.1

China/LOC_000Q1LB.1
S. R. Sun, Y. J. Zhang, W. W. Meng, X. H. Wang, A. Ajati, X. Dai, J. Ma, F. C. Zhang, H. P. Zhu, C. H. Feng, C. S. Hang & Y. X. Xie

Xinjiang Center for Disease Control and Prevention, College of Life Science and Technology, Xinjiang University

Sample details

Earliest release date
2005-10-26
Sampling location
China
Isolate name
CYT/TI05099

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-10-26
INSDC accession S segment

Host

Host

Submission details

Submission ID
DQ227495.1.S
Submitting group
Date submitted
2026-09-19 07:58:19 UTC
Date released
2026-09-19 08:00:04 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
235
Total inserted nucs S segment
16
Length S segment
1673 (91.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T16A
  • C22A
  • C31G
  • T32C
  • G34A
  • G35A
  • A45G
  • C81T
  • A84G
  • A98T
  • A102G
  • C126T
  • T141C
  • C150T
  • T166C
  • C171T
  • A173G
  • G174A
Deletions
N/A
Insertions

S segment

ins_0:TCTCAAAGAAACACGT

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:Y20F
  • NP:K45R
  • NP:D116E
  • NP:N125D
  • NP:A146T
  • NP:N150H
  • NP:Q179L
  • NP:D199E
  • NP:D262N
  • NP:R270K
  • NP:M353L
  • NP:L414P
  • NP:R428K
Deletions
N/A
Insertions
N/A

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