This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1LB.1

LOC_000Q1LB.1
M. J. Cardosa, Y. Podin, Y. W. Leong, D. Perera, P. McMinn & A. Kiyu

Universiti Malaysia Sarawak, Institute of Health and Community Medicine

Sample details

Earliest release date
2003-12-31
Isolate name
S19761-SAR-03

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2003-12-31
NCBI update date
2016-07-25
INSDC accession

Submission details

Submission ID
AY258312.1
Submitting group
Date submitted
2026-08-04 14:55:46 UTC
Date released
2026-08-04 14:57:38 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
169
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2441T
  • C2444T
  • A2447G
  • A2453G
  • C2468T
  • A2477G
  • T2489C
  • A2491G
  • G2492A
  • C2495T
  • C2501T
  • C2503A
  • T2513A
  • C2517T
  • C2527A
  • G2529A
  • C2534G
  • G2540A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P27S
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

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