This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q0MA.1

Kenya/LOC_000Q0MA.1/2020-09
D. C. A. Omoga, D. P. Tchouassi, M. Venter, E. O. Ogola, J. Osalla, A. Kopp, I. Slothouwer, B. Torto, S. Junglen & R. Sang

ICIPE, Human Health

Sample details

Collection date
2020-09
Earliest release date
2023-07-31
Sampling location
Kenya (Baringo County)
Isolate name
030_R102

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-07-31
INSDC accession S

Host

Is lab host
True
Host

Submission details

Submission ID
OQ357269.1.S
Submitting group
Date submitted
2026-02-27 15:36:26 UTC
Date released
2026-02-27 15:40:27 UTC

Files

Annotations

Alignment and QC

Total SNPs S
19
Length S
481 (26.6%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C150T
  • A193G
  • A213G
  • C225T
  • A311G
  • G330A
  • A333G
  • T372C
  • T384C
  • T387C
  • A393G
  • C429T
  • A441G
  • G444A
  • G477A
  • A492G
  • A528G
  • C562A
  • A570G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:S52G
  • NP:K91R
Deletions
N/A
Insertions
N/A

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