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LOC_000Q0MA.1
Download
Download FASTA
Download metadata TSV
India/LOC_000Q0MA.1/2019
P. Yadav,
A. Shete-Aich,
D. Nyayanit &
R. Sahay
National Institute of Virology, Maximum Containment Laboratory
Sample details
Collection date
2019
Earliest release date
2021-08-07
Sampling location
India (Gujarat State, Bhavnagar)
Isolate name
MCL-19-H-3508
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-05 13:42
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2021-08-07
INSDC accession L
MW298538.1
INSDC accession M
MW298546.1
Host
Host
human
Submission details
Submission ID
MW298538.1.L/MW298546.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-05 13:42:51 UTC
Date released
2026-06-05 13:46:26 UTC
Files
Annotations
LOC_000Q0MA.1.embl
Alignment and QC
Total SNPs L
1562
Total inserted nucs L
3
Length L
11911 (98.3%)
Total SNPs M
684
Total inserted nucs M
1
Length M
5325 (99.2%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
L
G
23
C
A
35
G
G
43
C
C
48
T
T
49
C
C
59
T
C
64
T
T
65
G
G
71
T
A
72
T
C
85
T
G
93
A
A
109
G
G
112
A
T
121
C
T
131
A
C
136
T
T
151
C
Show more
M
G
55
A
A
57
G
G
76
A
C
85
T
T
86
C
A
101
G
A
107
G
A
117
G
C
119
T
C
120
T
T
122
C
C
126
T
A
128
G
G
143
A
A
146
G
G
147
A
G
149
A
T
152
C
Show more
Deletions
N/A
Insertions
L
ins_25:T, ins_66:CC
M
ins_5169:G
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
I
3
M
GPC:
I
9
V
GPC:
L
10
F
GPC:
E
19
K
GPC:
E
26
G
GPC:
R
28
G
GPC:
T
34
V
GPC:
N
41
S
GPC:
P
42
Q
GPC:
S
44
P
GPC:
P
47
L
GPC:
S
53
P
GPC:
I
54
F
GPC:
L
56
P
GPC:
P
66
L
GPC:
S
68
N
GPC:
G
69
R
GPC:
V
76
P
Show more
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
V
RdRp:
R
80
N
RdRp:
V
82
I
RdRp:
L
90
I
RdRp:
I
114
V
RdRp:
I
157
M
RdRp:
T
163
V
RdRp:
A
168
T
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
V
214
I
RdRp:
K
275
R
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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