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LOC_000Q0MA.1
Download
Download FASTA
Download metadata TSV
Russia/LOC_000Q0MA.1/2002
J. D. Meissner,
S. S. Seregin,
S. V. Seregin,
O. I. Vyshemirskii,
N. V. Yakimenko,
S. V. Netesov,
V. S. Petrov &
O. I. Vyshemirski
SRC VB 'Vector', Laboratory of Virology
Sample details
Collection date
2002
Earliest release date
2006-03-01
Sampling location
Russia (Rostov region)
Isolate name
ROS/HUVLV-100
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2006-03-01
INSDC accession M segment
DQ206448.1
INSDC accession S segment
DQ206447.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
DQ206448.1.M/DQ206447.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-04 15:29:37 UTC
Date released
2026-09-04 15:31:04 UTC
Clade & Lineage
Closest reference M segment
M (MH396653.1) (variant)
Closest reference S segment
S1 (OL774851.1) (variant)
Files
Annotations
LOC_000Q0MA.1.embl
Alignment and QC
Total SNPs M segment
1052
Total inserted nucs M segment
5
Total deleted nucs M segment
3
Length M segment
5364 (98.3%)
Total SNPs S segment
256
Total inserted nucs S segment
16
Length S segment
1673 (91.7%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
M segment
T
36
A
G
46
A
A
47
G
T
63
C
T
64
C
G
65
A
T
67
A
G
72
C
A
76
G
T
78
C
G
80
A
T
81
C
C
88
T
T
96
C
T
98
C
C
99
T
G
103
A
A
104
G
Show more
S segment
T
16
A
C
31
G
T
33
C
G
34
T
A
51
G
T
63
C
A
65
G
A
93
G
A
98
T
C
99
T
A
105
G
G
118
A
C
126
T
T
141
C
C
150
T
G
155
A
T
159
A
T
166
C
Show more
Deletions
M segment
326-328
Insertions
M segment
ins_0:TCTC, ins_5167:T
S segment
ins_0:TCTCAAAGAAACACGT
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
I
3
T
GPC:
S
4
L
GPC:
M
6
V
GPC:
Y
7
C
GPC:
A
8
F
GPC:
V
9
I
GPC:
F
10
L
GPC:
C
11
Y
GPC:
C
15
L
GPC:
K
19
G
GPC:
T
20
A
GPC:
N
21
H
GPC:
G
22
R
GPC:
P
23
Q
GPC:
H
24
S
GPC:
G
26
A
GPC:
N
31
G
GPC:
H
33
N
Show more
NP
NP:
N
9
S
NP:
Y
20
F
NP:
V
27
M
NP:
S
39
N
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
Q
179
L
NP:
D
199
E
NP:
K
265
R
NP:
R
270
K
NP:
A
307
P
NP:
Y
311
F
NP:
V
327
I
NP:
N
419
S
NP:
R
428
K
Deletions
GPC
GPC:77
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
M segment
S segment
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