This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q0MA.1

Kenya/LOC_000Q0MA.1/2020-09
D. C. A. Omoga, D. P. Tchouassi, M. Venter, E. O. Ogola, J. Osalla, A. Kopp, I. Slothouwer, B. Torto, S. Junglen & R. Sang

ICIPE, Human Health

Sample details

Collection date
2020-09
Earliest release date
2023-07-31
Sampling location
Kenya (Baringo County)
Isolate name
030_OP3

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-07-31
INSDC accession S

Submission details

Submission ID
OQ357265.1.S
Submitting group
Date submitted
2026-03-13 15:41:04 UTC
Date released
2026-03-13 15:50:37 UTC

Host

Host

Lineage

Segment S Lineage
III

Files

annotations

Alignment and QC

Total SNPs S
39
Length S
499 (29.8%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C166T
  • C178A
  • G189A
  • T199C
  • G202A
  • A209G
  • C235T
  • C241T
  • A247G
  • G271A
  • C295T
  • A298G
  • A322G
  • A327G
  • G346A
  • A349G
  • A355G
  • A358C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R45K
  • NP:S52G
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
Deletions
N/A
Insertions
N/A

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