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LOC_000Q0MA.1
Download
Download FASTA
Download metadata TSV
Kazakhstan/LOC_000Q0MA.1/2018
G. N. Abuova,
N. Y. Pshenichnaya,
L. S. Karan,
F. A. Berdaliyeva,
D. S. Aliyev,
D. K. Sadyhova,
T. V. Polukchi &
S. D. Nurmagambet
Central Research Institute of Epidemiology, Department of molecular diagnostic and epidemiology
Sample details
Collection date
2018
Earliest release date
2023-06-10
Sampling location
Kazakhstan (Turkestan region)
Isolate name
KAZ/8/2018
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-11 12:53
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2023-06-10
INSDC accession M
OQ190963.1
INSDC accession S
OQ190962.1
Submission details
Submission ID
OQ190963.1.M/OQ190962.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-11 12:53:17 UTC
Date released
2026-03-11 12:59:17 UTC
Host
Host
Homo sapiens
Files
Annotations
LOC_000Q0MA.1.embl
Alignment and QC
Total SNPs M
604
Total inserted nucs M
1
Total deleted nucs M
11
Length M
5193 (95.3%)
Variant M
False
Total SNPs S
206
Total inserted nucs S
2
Length S
1530 (84.6%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
M segment
A
143
G
G
145
A
T
148
C
A
149
C
C
151
T
A
154
G
C
155
T
G
166
A
T
181
A
C
185
A
T
189
C
A
191
G
C
200
T
G
203
A
A
204
G
C
218
T
T
220
A
G
226
A
Show more
S segment
A
98
T
A
102
G
C
126
T
T
141
C
C
150
T
T
165
C
T
166
C
A
173
G
C
183
T
A
186
G
T
204
C
C
225
T
T
234
A
G
246
A
A
252
C
T
261
C
T
267
C
T
273
C
Show more
Deletions
M segment
5285-5295
Insertions
M segment
ins_5166:A
S segment
ins_1520:CT
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
K
19
E
GPC:
N
21
H
GPC:
P
23
S
GPC:
N
31
K
GPC:
H
33
N
GPC:
V
34
A
GPC:
M
35
V
GPC:
P
38
S
GPC:
D
39
S
GPC:
P
44
S
GPC:
S
49
R
GPC:
A
51
T
GPC:
P
58
S
GPC:
S
64
T
GPC:
G
69
E
GPC:
L
70
P
GPC:
Y
77
H
GPC:
S
79
F
Show more
NP
NP:
Y
20
F
NP:
K
45
R
NP:
D
116
E
NP:
N
150
H
NP:
Q
179
L
NP:
D
199
E
NP:
R
270
K
NP:
S
275
N
NP:
R
428
K
Deletions
N/A
Insertions
N/A
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
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