This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q0MA.1

Turkey/LOC_000Q0MA.1/2012_TO_2015
M. O. Timurkan & H. Aydin

Ataturk University, Faculty of Veterinary Medicine, Department of Virology

Sample details

Collection date
2012/2015
Earliest release date
2020-03-28
Sampling location
Turkey
Isolate name
TR/TUNCELI2012/OHE/45/S

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2020-03-28
INSDC accession S

Host

Host

Submission details

Submission ID
MT178301.1.S
Submitting group
Date submitted
2026-08-27 11:46:24 UTC
Date released
2026-08-27 11:50:55 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
54
Length S
333 (19.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A337G
  • A348G
  • A349G
  • G353T
  • A358G
  • T364C
  • G367A
  • A379G
  • G381A
  • T382C
  • A386G
  • C387T
  • T388A
  • A394G
  • C400T
  • C403T
  • C406T
  • G409C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:K98R
  • NP:A100S
  • NP:S109N
  • NP:T111V
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:F204I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue