This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q0MA.1

Pakistan/LOC_000Q0MA.1/2017-08-08
Shahid MF, Yaqub T, Ali M, Ul-Rahman A, Bente DA, M. F. Shahid, T. Yaqub, M. Ali, A. Ul-Rahman & D. A. Bente

University of Veterinary and Animal Sciences, Institute of Microbiology

Sample details

Collection date
2017-08-08
Earliest release date
2021-04-21
Sampling location
Pakistan
Isolate name
PAK-RWP-T/85

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-08 08:02insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-04-21
INSDC accession S segment

Host

Host

Submission details

Submission ID
MW915541.1.S
Submitting group
Date submitted
2026-05-08 08:02:23 UTC
Date released
2026-05-08 08:12:51 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
26
Length S segment
195 (10.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G339A
  • C342A
  • G351A
  • A363G
  • T387A
  • C390T
  • A393C
  • G409T
  • T414C
  • A423G
  • C429T
  • T430C
  • G432C
  • A435G
  • A441G
  • G444A
  • T453C
  • G477A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D116E
  • NP:A124S
Deletions
N/A
Insertions
N/A

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