This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZWV.1

India/LOC_000PZWV.1/2017-08-20
R. Waghchaure & M. Lavania

ICMR-National Institute of Virology, Enteric Viruses Group

Sample details

Collection date
2017-08-20
Earliest release date
2025-05-21
Sampling location
India (Pune)
Isolate name
NIV1850137

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-01 15:12insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-05-21
NCBI update date
2025-05-21
INSDC accession

Host

Host

Submission details

Submission ID
PV611645.1
Submitting group
Date submitted
2026-04-01 15:12:22 UTC
Date released
2026-04-01 15:42:17 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
145
Length
665 (8.97%)
Variant
False

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • A2619T
  • C2620A
  • A2621G
  • G2622T
  • T2625C
  • G2626A
  • T2634C
  • A2637T
  • A2640G
  • C2643T
  • C2644A
  • G2646A
  • T2670A
  • A2673G
  • C2679A
  • A2680G
  • G2682C
  • C2688G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:I179V
  • VP1:L183M
  • VP1:A213E
  • VP1:P215L
  • VP1:S217A
  • VP1:A220L
Deletions
N/A
Insertions
N/A

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