This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZKH.1

India/LOC_000PZKH.1/2019
P. Yadav, A. Shete-Aich, D. Nyayanit & R. Sahay

National Institute of Virology, Maximum Containment Laboratory

Sample details

Collection date
2019
Earliest release date
2021-08-07
Sampling location
India (Rajasthan State, Sirohi)
Isolate name
MCL-19-H-3154

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-08-07
INSDC accession M segment

Host

Host

Submission details

Submission ID
MW298542.1.M
Submitting group
Date submitted
2026-05-09 06:41:32 UTC
Date released
2026-05-09 06:48:19 UTC

Clade & Lineage

Closest reference M segment
M (MH396653.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs M segment
341
Total inserted nucs M segment
1
Length M segment
5337 (97.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • G51A
  • A53G
  • G65A
  • G72A
  • T78C
  • A97G
  • A127G
  • C133T
  • G145A
  • T148C
  • A149C
  • C151T
  • C155T
  • G166A
  • A171G
  • T181A
  • C185G
  • A204G
Deletions
N/A
Insertions

M segment

ins_5166:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:I3M
  • GPC:N21H
  • GPC:P23S
  • GPC:E28G
  • GPC:N31K
  • GPC:H33D
  • GPC:D39G
  • GPC:P47L
  • GPC:V54F
  • GPC:S64T
  • GPC:P66L
  • GPC:G69R
  • GPC:V76P
  • GPC:S80P
  • GPC:I82A
  • GPC:P96L
  • GPC:V102I
  • GPC:V103I
Deletions
N/A
Insertions
N/A

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