This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZKH.1

Namibia/LOC_000PZKH.1
F. J. Burt & R. Swanepoel

National Institute for Communicable Diseases, Special Pathogens Unit

Sample details

Earliest release date
2005-06-01
Sampling location
Namibia
Isolate name
spu24/01

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-06-01
INSDC accession S

Submission details

Submission ID
AY905648.1.S
Submitting group
Date submitted
2026-09-07 16:14:49 UTC
Date released
2026-09-07 16:15:29 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
38
Length S
450 (26.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G189A
  • T199C
  • G202A
  • C235T
  • A247G
  • G256A
  • T289C
  • C295T
  • A298G
  • A322G
  • A325G
  • G328A
  • G346A
  • A358C
  • C361T
  • T385C
  • G397A
  • C400T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R45K
  • NP:T124A
  • NP:G125N
  • NP:L179Q
Deletions
N/A
Insertions
N/A

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