This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
SeqSets
Login
Loculus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
CCHF (Multi-Ref)
Test Dummy Organism
Test organism (with files)
Ebola Sudan
Enterovirus
Test organism (without alignment)
West Nile Virus
SeqSets
Login
Docs
API docs
Crimean-Congo Hemorrhagic Fever Virus
|
Browse data
Submit sequences
Select organism section
Browse data
Submit sequences
LOC_000PDRR.1
Download
Download FASTA
Download metadata TSV
China/LOC_000PDRR.1/2015
A. Moming,
X. Yue,
S. Shen,
C. Chang,
C. Wang,
T. Luo,
Y. Zhang,
R. Guo,
Z. Hu,
F. Deng &
S. Sun
Xinjiang University, Xinjiang Key Laboratory of Biological Resources and Genetic Engineering
Sample details
Collection date
2015
Earliest release date
2018-03-21
Sampling location
China
Isolate name
WG15806
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-04-09 14:51
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2018-03-21
INSDC accession S
MG696080.1
Host
Host
hard ticks; hardbacked ticks; scale ticks (Dermacentor nuttalli)
Submission details
Submission ID
MG696080.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-09 14:51:52 UTC
Date released
2026-04-09 14:58:39 UTC
Lineage
Segment S Lineage
IV.2
Files
Annotations
LOC_000PDRR.1.embl
Alignment and QC
Total SNPs S
34
Length S
220 (13.2%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
S
G
330
A
A
331
G
C
332
A
T
334
G
A
337
G
G
346
A
A
351
T
G
367
A
C
370
T
T
382
C
T
385
C
A
394
G
C
403
G
C
406
T
G
409
C
G
418
A
A
425
G
G
429
A
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
NP
NP:
L
93
M
NP:
N
99
I
NP:
D
116
E
NP:
T
124
A
NP:
G
125
D
NP:
A
146
T
NP:
N
150
H
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
Report an issue with this sequence or metadata
Create GitHub issue