This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PDQT.1

Display Name: LOC_000PDQT.1
M. D. Parker, P. J. Glass, G. B. Jennings, R. Lofts, J. F. Smith, M. M. Miller, R. Schoepp & K. W. Spik

Submission details

Submission ID
U39455.2.M
Submitting group
Date submitted
2025-07-11 18:53:07 UTC
Date released
2025-07-11 18:57:55 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-11 18:53insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Michael D. Parker, Virology Divison, USAMRIID, Bldg. 1425 Fort Detrick, Frederick, MD 21702

Alignment and QC metrics M

Completeness M
99.57%
Length M
5123
Total ambiguous nucs M
0
Total deleted nucs M
221
Total frame shifts M
0
Total inserted nucs M
1
Total SNPs M
14
Total unknown nucs M
0

Sample details

Earliest release date
1995-11-14
Collection date (upper bound)
1995-11-14

INSDC

INSDC accession M
NCBI release date
1995-11-14

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • M:T25C
  • M:C205A
  • M:A1142C
  • M:C1636T
  • M:A1674G
  • M:C2222T
  • M:A2260G
  • M:A2923C
  • M:G3565A
  • M:G4473A
  • M:A5103G
  • M:T5195G
  • M:T5197C
  • M:G5346A
    • Deletions
    M:22, M:26-70, M:5168-5192, M:5199-5341, M:5350-5356
    Insertions
    ins_M:5344:G

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    GPC

  • GPC:P38H
  • GPC:S515F
  • GPC:I528V
  • GPC:K723R
  • GPC:K944T
  • GPC:G1158E
  • GPC:G1461S
  • GPC:R1671G
    • Deletions
    None
    Insertions
    None

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