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LOC_000PDBL.1
Download
Download FASTA
Download metadata TSV
France/LOC_000PDBL.1/2019-10-16
M. Bisseux,
B. S. Bakyono,
A. Mirand,
C. Henquell &
J.-L. Bailly
Centre National de Reference Enterovirus et Parechovirus - CHU Clermont ferrand, virologie
Sample details
Collection date
2019-10-16
Earliest release date
2025-02-05
Sampling location
France
Isolate name
CVA10_190048697202_FRA19
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2025-02-05
NCBI update date
2025-02-05
INSDC accession
PQ119797.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PQ119797.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-08 13:32:21 UTC
Date released
2026-09-08 13:44:39 UTC
Clade
Clade CV-A10
D
Genotype
Genotype
CV-A10
Alignment and QC
Total SNPs
1517
Total inserted nucs
8
Total deleted nucs
3
Length
7412 (100%)
Nucleotide mutations
Mutations called relative to the
AY421767.1
reference
Substitutions
T
14
A
C
21
T
A
22
T
T
28
C
C
40
T
A
60
G
G
63
A
T
88
C
A
89
C
C
90
A
T
95
A
T
96
C
G
101
T
T
102
A
C
108
A
A
109
C
T
110
A
T
117
C
Show more
Deletions
308-310
Insertions
ins_102:C, ins_125:G, ins_573:T, ins_7372:A, ins_7395:TTTG
Amino acid substitutions
Substitutions called relative to the
AY421767.1
reference
Substitutions
2A
2A:
V
12
I
2A:
V
29
A
2A:
R
68
K
2A:
S
105
A
2A:
L
123
I
2B
2B:
S
22
A
2B:
N
30
T
2B:
H
31
Y
2B:
D
60
E
2B:
S
94
P
2B:
M
95
I
2C
2C:
N
13
S
2C:
K
43
R
2C:
I
76
M
2C:
F
90
Y
2C:
A
103
V
2C:
I
127
V
2C:
Y
243
F
2C:
K
255
R
2C:
R
280
K
2C:
K
293
R
2C:
M
306
V
2C:
N
316
S
2C:
V
320
I
3A
3A:
P
3
L
3A:
K
15
R
3A:
T
17
A
3A:
E
39
D
3B
3B:
A
10
V
3B:
V
15
T
3C
3C:
I
15
V
3C:
I
30
V
3C:
S
41
A
3C:
I
49
V
3C:
V
56
I
3C:
A
95
S
3C:
I
116
V
3D
3D:
K
7
R
3D:
N
16
S
3D:
N
32
D
3D:
S
93
N
3D:
E
99
D
3D:
L
123
M
3D:
V
134
I
3D:
T
135
S
3D:
S
139
T
3D:
L
143
F
3D:
N
213
D
3D:
S
228
A
3D:
S
236
G
3D:
L
251
V
3D:
R
346
K
3D:
T
392
V
3D:
R
396
K
3D:
I
442
V
3D:
K
444
R
VP1
VP1:
S
13
G
VP1:
T
21
N
VP1:
S
22
N
VP1:
G
23
T
VP1:
Q
24
T
VP1:
D
25
N
VP1:
N
27
E
VP1:
T
28
S
VP1:
G
31
N
VP1:
M
70
V
VP1:
T
79
S
VP1:
I
80
V
VP1:
S
81
N
VP1:
L
95
M
VP1:
T
96
S
VP1:
V
107
T
VP1:
F
148
Y
VP1:
V
178
I
Show more
VP2
VP2:
L
132
I
VP2:
S
137
A
VP2:
N
150
T
VP2:
A
157
N
VP2:
S
160
T
VP2:
N
162
H
VP2:
V
166
I
VP2:
S
176
A
VP2:
I
216
V
VP2:
V
237
I
VP3
VP3:
L
2
I
VP3:
T
4
A
VP3:
E
17
D
VP3:
S
29
T
VP3:
S
33
I
VP3:
D
60
E
VP3:
N
65
S
VP3:
A
73
S
VP3:
A
142
T
VP4
VP4:
S
7
T
VP4:
R
9
K
VP4:
G
16
S
VP4:
S
42
T
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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