This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PCGB.1

Iran/LOC_000PCGB.1/2007-07
F. Tahmasebi, S. M. Ghiasi, E. Mostafavi, M. Moradi, N. Piazak, A. Mozafari, A. Haeri & S. Chinikar

Pasteur Institute of Iran, Laboratory of Arboviruses and Viral Haemorrhagic Fevers (National Ref. Lab)

Sample details

Collection date
2007-07
Earliest release date
2010-03-08
Sampling location
Iran
Isolate name
CT12

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2010-03-08
INSDC accession S

Host

Host

Submission details

Submission ID
GU456725.1.S
Submitting group
Date submitted
2026-09-02 14:11:42 UTC
Date released
2026-09-02 14:12:50 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
68
Length S
494 (29.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T182C
  • G190A
  • G196A
  • T199C
  • C208T
  • C217T
  • G229A
  • C235T
  • A268C
  • G271A
  • T289C
  • G292A
  • C295T
  • A298C
  • T303C
  • A322T
  • A325G
  • T334G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:F204I
  • NP:V205C
Deletions
N/A
Insertions
N/A

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