This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBTP.1

Display Name: LOC_000PBTP.1
J. R. Wang, Y. C. Tuan, H. P. Tsai, J. J. Yan, C. C. Liu & I. J. Su

Sample details

Collection date (upper bound)
2002-01-16
Earliest release date
2002-01-16
Isolate name
N7008-TW-99

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-10 14:01insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
National Cheng Kung University, Medical Technology

INSDC

NCBI release date
2002-01-16
NCBI update date
2002-01-16
INSDC accession

Alignment and QC metrics

Length
648
Total SNPs
81
Total inserted nucs
3
Total deleted nucs
2
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Frame shifts
[]
Completeness
8.73%
Stop codons
[]
Total stop codons
0

Submission details

Submission ID
AY055152.1
Submitting group
Date submitted
2025-12-10 14:01:10 UTC
Date released
2025-12-10 14:04:16 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T99C
  • G100A
  • C120T
  • G121A
  • A124C
  • C126A
  • A130G
  • T135C
  • T142C
  • G143A
  • A146G
  • A148G
  • T149C
  • T155C
  • G157A
  • C158T
  • A159G
  • A180T
    • Deletions
    693, 738
    Insertions
    ins_128:CT, ins_703:A

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue