This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P9QX.1

Iran/LOC_000P9QX.1/2016-05-02
M. Fazlalipour, V. Baniasadi, T. Jalali, Y. Jamshidi, T. Mohammadi, S. Azad-Manjiri, S. Khakifirouz & M. Salehi-Vaziri

Tehran University of Medical Sciences, virology

Sample details

Collection date
2016-05-02
Earliest release date
2016-07-11
Sampling location
Iran
Isolate name
Iran-4846

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-01 08:33insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-07-11
INSDC accession S segment

Submission details

Submission ID
KX432285.1.S
Submitting group
Date submitted
2026-04-01 08:33:00 UTC
Date released
2026-04-01 08:36:33 UTC

Host

Host

Clade & Lineage

Closest reference S segment
S1 (OL774851.1)

Files

Annotations

Alignment and QC

Total SNPs S segment
52
Length S segment
426 (23.6%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C150T
  • G153A
  • T156C
  • T166C
  • A173G
  • G174A
  • G180A
  • A186G
  • C192T
  • C201T
  • G231A
  • G243A
  • A252C
  • T273C
  • G276A
  • G282C
  • T287C
  • G306T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K45R
  • NP:V83A
  • NP:D116E
  • NP:A124S
Deletions
N/A
Insertions
N/A

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