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Loculus
Crimean-Congo Hemorrhagic Fever Virus
Crimean-Congo Hemorrhagic Fever Virus
Test Dummy Organism
Test organism (without consensus sequences)
Ebola Sudan
Test organism (without alignment)
West Nile Virus
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LOC_000P936.1
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Display Name: China/LOC_000P936.1/1984
Moming,
A.; Zhu,
Q.; Bai,
Y.; Jin,
J.; Wu,
Q.; Su,
Z.; Tang,
S.; Zhang,
Y.; Shen,
S.; Deng,
F.
Submission details
Submission ID
OR823873.1.M
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-04-18 08:49:47 UTC
Date released
2025-04-18 08:54:38 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2025-04-18 08:49
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Wuhan Institute of Virology, Chinese Academy of Sciences
Alignment and QC metrics M
Completeness M
97.80%
Length M
5249
Total ambiguous nucs M
0
Total deleted nucs M
0
Total frame shifts M
0
Total inserted nucs M
1
Total SNPs M
1028
Total unknown nucs M
0
Sample details
Earliest release date
2024-12-21
Collection country
China
Collection date
1984
Collection date (lower bound)
1984-01-01
Collection date (upper bound)
1984-12-31
Host
Host name scientific
Ixodoidea
Host taxon id
297308
INSDC
INSDC accession M
OR823873.1
NCBI release date
2024-12-21
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
M
M:
G
50
T
M:
A
51
G
M:
G
56
A
M:
A
57
C
M:
A
70
G
M:
T
71
A
M:
A
80
G
M:
C
81
T
M:
G
84
T
M:
C
85
T
M:
T
86
C
M:
A
88
G
M:
A
90
G
M:
C
92
T
M:
C
96
T
M:
T
98
C
M:
T
100
C
M:
T
102
C
Show more
Deletions
None
Insertions
ins_M:5171:C
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
H
2
Y
GPC:
I
3
T
GPC:
S
4
P
GPC:
M
6
L
GPC:
Y
7
C
GPC:
I
9
V
GPC:
C
15
W
GPC:
G
16
S
GPC:
G
18
E
GPC:
E
19
G
GPC:
T
20
S
GPC:
S
23
L
GPC:
H
24
S
GPC:
E
26
K
GPC:
R
28
Q
GPC:
N
30
S
GPC:
K
31
N
GPC:
D
33
S
Show more
Deletions
GPC:197, GPC:209, GPC:210
Insertions
ins_GPC:212:QPV
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