This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8UQ.1

Display Name: Malaysia/LOC_000P8UQ.1
C. Yoke-Fun & S. AbuBakar

Sample details

Collection date (upper bound)
2006-08-25
Earliest release date
2006-08-25
Collection country
Malaysia
Isolate name
UH1/PM/1997

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-21 15:26insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
AbuBakar S., Medical Microbiology, University of Malaya, Faculty of Medicine, Kuala Lumpur 50603

INSDC

NCBI release date
2006-08-25
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
7411
Total SNPs EV-A71
1433
Total inserted nucs EV-A71
4
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
99.99%

Submission details

Submission ID
AM396587.1.EV-A71
Submitting group
Date submitted
2025-10-21 15:25:45 UTC
Date released
2025-10-21 15:30:38 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T13G
  • T17G
  • T20G
  • C21T
  • C28T
  • T36C
  • T41G
  • G42T
  • T51C
  • A54T
  • A60T
  • T61C
  • C62T
  • T63A
  • T67A
  • A76G
  • T88C
  • A89G
    • Deletions
    None
    Insertions
    ins_128:CT, ins_739:TC

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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