This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8UQ.1

Display Name: Spain/LOC_000P8UQ.1/2020-06
B. Febrer-Sendra, P. Fernandez-Soto, J. Garcia-Bernalt Diego, B. Crego-Vicente, A. Negredo, J. L. Munor-Bellido, M. Belhassen-Garcia, M. P. Sanchez-Seco & A. Muro

Submission details

Submission ID
OP776631.1.S
Submitting group
Date submitted
2025-07-08 17:25:07 UTC
Date released
2025-07-08 17:29:01 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-08 17:25insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Salamanca, Parasitology Department

Alignment and QC metrics S

Completeness S
11.78%
Length S
200
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
15
Total unknown nucs S
3

Sample details

Earliest release date
2023-05-23
Collection country
Spain
Collection date
2020-06
Collection date (lower bound)
2020-06-01
Collection date (upper bound)
2020-06-30
Isolate name
P3

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession S
NCBI release date
2023-05-23

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:A460G
  • S:C484A
  • S:A493G
  • S:A520G
  • S:C529T
  • S:T535C
  • S:G544A
  • S:A578C
  • S:G586A
  • S:T591A
  • S:G592A
  • S:C619T
  • S:A631T
  • S:A639G
  • S:A649G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:L179Q
  • NP:H195R
    • Deletions
    None
    Insertions
    None

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