This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8QY.1

Display Name: Russia/LOC_000P8QY.1/2016
V. A. Ternovoi, A. V. Gladysheva, A. O. Sementsova, A. V. Zaykovskaya, A. S. Volynkina, E. S. Kotenev, A. P. Agafonov & V. B. Loktev

Sample details

Collection date
2016
Collection date (lower bound)
2016-01-01
Collection date (upper bound)
2016-12-31
Earliest release date
2020-03-16
Collection country
Russia
Isolate name
Rostov3-24/Russia2016

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-06 12:29insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biotehnology 'Vector', Department of Molecular Virology

INSDC

NCBI release date
2020-03-16
INSDC accession S

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics S

Length S
191
Total SNPs S
14
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
11.42%

Submission details

Submission ID
MN218694.1.S
Submitting group
Date submitted
2025-11-06 12:29:15 UTC
Date released
2025-11-06 12:34:14 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:T1096A
  • S:T1099C
  • S:C1100T
  • S:C1141T
  • S:T1144C
  • S:T1156C
  • S:T1174C
  • S:C1181A
  • S:T1183C
  • S:C1189T
  • S:T1195G
  • S:T1204C
  • S:A1222T
  • S:G1234A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:H376N
    • Deletions
    None
    Insertions
    None

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