This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8QY.1

Display Name: Taiwan/LOC_000P8QY.1
C. H. Chen, M. T. Wan & J. W. Tsai

Sample details

Collection date (upper bound)
2005-10-03
Earliest release date
2005-10-03
Collection country
Taiwan
Isolate name
C33

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-20 09:43insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Tatung University, Bioengineering

INSDC

NCBI release date
2005-10-03
INSDC accession CV-A16

Alignment and QC metrics CV-A16

Length CV-A16
400
Total SNPs CV-A16
45
Total inserted nucs CV-A16
1
Total deleted nucs CV-A16
6804
Total ambiguous nucs CV-A16
0
Total unknown nucs CV-A16
0
Total frame shifts CV-A16
0
Completeness CV-A16
97.17%

Submission details

Submission ID
DQ211937.1.CV-A16
Submitting group
Date submitted
2025-11-20 09:42:36 UTC
Date released
2025-11-20 09:47:16 UTC

Clade

Clade CV-A16
B

Genotype

Genotype
CV-A16

Files

Annotations

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • T200A
  • C201G
  • A202C
  • A203T
  • A205T
  • A207G
  • C208T
  • T209G
  • C213T
  • A214G
  • C217T
  • T220C
  • G224A
  • G226A
  • A227G
  • C236T
  • C242A
  • G263A
    • Deletions
    565-7368
    Insertions
    ins_268:A

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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