This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M279.1

Display Name: Serbia/LOC_000M279.1/2018
M. Suka, V. Cirkovic, M. Siljic, M. Jankovic, A. Loncar, G. Stamenkovic & M. Stanojevic

Sample details

Collection date
2018
Collection date (lower bound)
2018-01-01
Collection date (upper bound)
2018-12-31
Earliest release date
2024-04-17
Collection country
Serbia
Isolate name
SRWNV000007/Serbia/2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-20 15:59insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Belgrade, Faculty of Medicine, Institute of Microbiology and Immunology, Virology Department

INSDC

NCBI release date
2024-04-17
NCBI update date
2024-04-17
INSDC accession

Host

Host taxon id
Host name scientific
Culex pipiens

Alignment and QC metrics

Length
832
Total SNPs
173
Total inserted nucs
0
Total deleted nucs
64
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
1
Frame shifts
NS5:510-905(nt:9208-10395)
Completeness
8.12%
Total stop codons
0

Submission details

Submission ID
PP622976.1
Submitting group
Date submitted
2025-10-20 15:59:14 UTC
Date released
2025-10-20 16:15:47 UTC

Lineage

Lineage
2

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G9210A
  • G9216A
  • C9219A
  • C9222G
  • A9225G
  • A9228G
  • G9231T
  • T9234G
  • C9240T
  • C9241T
  • C9244A
  • G9245A
  • T9246G
  • T9252C
  • C9255A
  • C9258A
  • C9259A
  • G9260A
    • Deletions
    9144-9207
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions
    Deletions
    NS5:489-509
    Insertions
    None

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