This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M1GS.1

Romania/LOC_000M1GS.1/2018-01-01
S. Dinu, I. G. Stancu, A. I. Cotar, C. S. Ceianu, G. V. Pintilie, I. Karpathakis, E. Falcuta, O. Csutak, F. L. Prioteasa & G. V. Tiron

National Military Medical Institute for Research and Development, Molecular Epidemiology for Communicable Diseases Laboratory

Sample details

Collection date
2018
Earliest release date
2024-11-05
Sampling location
Romania
Isolate name
RO_mo2M/2018

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2024-11-05
NCBI update date
2024-11-05
INSDC accession

Host

Host

Submission details

Submission ID
PP533480.1
Submitting group
Date submitted
2026-08-26 14:03:36 UTC
Date released
2026-08-26 14:29:51 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
127
Total deleted nucs
510
Length
633 (10.4%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G9435A
  • T9438G
  • T9441C
  • T9444C
  • A9447G
  • G9449A
  • C9453T
  • C9456G
  • T9465C
  • A9477G
  • G9486A
  • G9489A
  • T9492C
  • A9495G
  • A9498G
  • T9501A
  • C9504G
  • C9507T
Deletions
9385-9432, 10057-10518
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
Deletions
N/A
Insertions
N/A

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