This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M0T4.1

Iraq/LOC_000M0T4.1/2023-12-12
S. Y. Albaroodi, W. A. Alobaidii, D. A. Abdullah, S. D. Ola-Fadunsin & F. I. Gimba

College of Veterinary Medicine, University of Mosul, Microbiology

Sample details

Collection date
2023-12-12
Earliest release date
2024-03-10
Sampling location
Iraq (Mosul)
Isolate name
SWD74

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-03 13:47insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-03-10
NCBI update date
2024-03-10
INSDC accession

Host

Host

Submission details

Submission ID
PP430512.1
Submitting group
Date submitted
2026-03-03 13:47:06 UTC
Date released
2026-03-03 14:05:52 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
12
Length
2400 (21.8%)
Amino Acid Mutations from founder clade
  • NS1:A5P
  • env:K93R
  • env:T126I
  • env:I159A
  • env:V364E
  • prM:D66H
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A630G
  • C660T
  • G661C
  • G1074A
  • A1320G
  • T1442C
  • C1465T
  • A1518T
  • T1656C
  • T2057A
  • C2466T
  • G2482C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

NS1

  • NS1:A5P

env

  • env:V159A
  • env:L167F
  • env:V364E

prM

  • prM:D66H
Deletions
N/A
Insertions
N/A

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